SubtiBank SubtiBank
yfiB [2017-06-07 16:04:13]
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yfiB [2017-06-07 16:04:13]

similar to ABC transporter (ATP-binding protein)
locus
BSU08210
pI
8.93
mw
63.77 kDa
protein length
573 aa Sequence Blast
gene length
1719 bp Sequence Blast
function
unknown
product
ABC transporter (ATP-binding protein)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    893,904 → 895,625

    The protein

    Protein family

  • [SW|ABC transporter] domain (according to Swiss-Prot)

    • [SW|Domains]

  • has both a membrane-spanning and an ATP-binding domain [Pubmed|10092453]

    • Structure

  • [PDB|3QF4] ([protein|288CA73D93B1E5106E1C6CE5E7E2E8BE2A6BD3F3|YfiB]-[protein|E85814EDF232D21A42380D559EAD2CDFB41F19DB|YfiC] complex from Thermotoga maritima, 44% identity) [pubmed|22447242]

    • [SW|Localization]

  • cell membrane [Pubmed|10092453]

    • Expression and Regulation

    Operons

    genes
    [gene|288CA73D93B1E5106E1C6CE5E7E2E8BE2A6BD3F3|yfiB]-[gene|E85814EDF232D21A42380D559EAD2CDFB41F19DB|yfiC]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C292 (yfiB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2290 NBRP B. subtilis, Japan]

    • References

  • 10092453,22447242